Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRNEFYNQLINSEPIGFIDPFTDLGEFDSIQMKFKQPVRNLVNKYSGKPYNLSWQNKIEQMRVLYIKYQKSLKLEDEEQEVHNR-----VKNKKSKKYVHEIVTTYLKLGFRFKEIEARVSLFNTRLRRNWKRSDYVTTDNPEFYLKKDLQNGYCSPNSFLPRSMKIN |
4UXH Chain:A ((28-90)) | -------------------------------------------------------------------------------REIHARRSCFVIKYSKDTRYDEHNVA----LMLR---AQAAVSQL-TEVRDTWKRFDVLAIDEGQFFSDLVDFCNTAADAGKVVMVSALD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 978 for 260 contacts (3.8/contact) +
2D Compatibility (PS) -5490 + (NN) 1779 + (LL) 5972
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -1761.0 ( -6.77 by residue)
QMean score : 0.448
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