Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYVIFSFEEGDYLCDNKDKLLIFESRGLAYQYMQKHYLKPIPLQK--TKRIMYPMSYYQAPFKVQQVC
4P6Z Chain:G ((52-100))
-----FREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHL
General information:
TITO was launched using:
RESULT:
Template:
4P6Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8330 for 276 contacts (-30.2/contact) +
2D Compatibility (PS) -4676 + (NN) 723 + (LL) 760
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -15673.0 ( -56.79 by residue)
QMean score : 0.108
(partial model without unconserved sides chains):
PDB file :
Tito_4P6Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P6Z-query.scw
PDB file :
Tito_Scwrl_4P6Z.pdb
: