Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKKVTMTISGEMILIEYYGENFPLH-PQEWKDYHSFWQEDYIRFHFQTDIGTLTIYDGNYDLTLLWGEPVHRIEKLYHQLLTDPIPVMVYGDERFQEAYRTENGQTKNLYLEHVCNVCKEAYEVLFKQINQKERNT |
5C1I Chain:A ((112-147)) | ----------GEKGLVESY-EARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALALMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEVGWREWEVRLPVAHPRFQQVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5476 for 156 contacts (-35.1/contact) +
2D Compatibility (PS) -3345 + (NN) 1812 + (LL) 988
1D Compatibility (HY) -800 + (ID) 750
Total energy: -7571.0 ( -48.53 by residue)
QMean score : 0.030
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