Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDMIKRWIEKIKSSAIAKPFVVTKKWFQDNVIKRKLVVFSVLFVAWISLLLGAIYSPQRQTYTDEQLKTKQAFENGTGEMRLSSQTYSPETGIIILQFETKDSTSPVDRGIDTKRLKWNLYAKKKTSQTTMEIIPIVDNKISIIIRNVPEDFGAYAIDITNKTISSSSIDIDVSNPSEEQEKPSKTKDNNTDNVIQFYVTTQSSQLKT--GSLKKVSREEFALSEINEEKDFQTGQIKKLSRSIKQLKTSIEDDESRKSGLLKEAEYLSGEDLESNQKDIATIESNIETKNRSIETATQNIEKVQAKIASLEKKATAIKDGTFEFSNPIETVEMK |
| 4ZXQ Chain:A ((37-142)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYVIAQGTDVGAIAGKANEAGQGAYDAQVKNDEQDVE---LADHEARIKQLRIDVDDHESRITANTKAITALNVR-VTTAEGEIASLQTNVSALDGRVTTAENNISALQADY--------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 24634 for 402 contacts (61.3/contact) +
2D Compatibility (PS) -11007 + (NN) 188 + (LL) 15860
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: 24375.0 ( 60.63 by residue)
QMean score : 0.431
|
|
|