Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEIKIRSIPEKTWAQLHMISEEYEYPSFNEFMLAQLQRIVENGGLDLYDNKFAETLAVIKEQQAQILDQLLKNE-------------IKLLAYHAKQDIVEELTTDWLRFMDDVDALAAERGAGGR
4XCZ Chain:A ((285-352))
----------------------------------------------IKLYSDNFDEILTACEDKSPEFISKLLKTENILFEKNHLGWSPIIIAAYHGNMDVIEWLVSKGVNINDRNYKGTTVAMYFKD
General information:
TITO was launched using:
RESULT:
Template:
4XCZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7652 for 315 contacts (-24.3/contact) +
2D Compatibility (PS) -5855 + (NN) -4130 + (LL) 4016
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -20071.0 ( -63.72 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_4XCZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XCZ-query.scw
PDB file :
Tito_Scwrl_4XCZ.pdb
: