Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRKIIGLTLLSLSVLTLTACGNRSDKSANKSDIKVAMVTNQGGVDDKSFNQSAWEGLQKWGKKKGLTKGNGFDYFQSSNESDHANNLDTAASSGYNLIFGIGFGLHDTIEKVSENNKDVKYVIVDDIIKGKENVASVTFADNEAAYLAGVAAAKTTKT---KTVGFIGGMEGVVVKRFEAGFKAGVKSIDPAIKVAVSYAGSFTDAAKGKTIAATQYATGVDVIYQAAGGTGAGIFSEAKTENETRKESNKVWVIGVDRDQSQEGNYVSKDGKKANFVLASTIKEVGKSLQSVAELTEKKQYPGGKVTVFGLKDSGVDIKEH--QLSSEGSVAVKKAKEDIVSGKIQVPMK |
2FQX Chain:A ((4-312)) | --------------------------------DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAK----CKYVTASTDAEYVPSLSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVIDAVVQDRDNVVSAVFGQNEGSFLVGVAAALKAKEAGKSAVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGTGNGVIKEAR---DRRLNGQDVWVIGVDRDQYMDGVY---DGSKS-VVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGLEDKAVGIPEENPNLSSAVMEKIRSFEEKIVSKEIVVPVR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85506 for 2812 contacts (-30.4/contact) +
2D Compatibility (PS) -34118 + (NN) -19903 + (LL) 1820
1D Compatibility (HY) -27600 + (ID) 6050
Total energy: -171357.0 ( -60.94 by residue)
QMean score : 0.488
|
|
|