Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKTYRVKSDKDFQMIFSRGKNVANRKFVIYYLEK-EQKHFRVGISVSKKLGNAVVRNAIKRKIRHVLLSQKTALQDYDFVVIARKGVEELNYQALEKNLIHVLKIAGLI
1A6F Chain:A ((4-108))
LKKRNRLKKNEDFQKVFKHGTSVANRQFVLYTLDQPENDELRVGLSVSKKIGNAVMRNRIKRLIRQAFLEEKERLKEKDYIIIARKPASQLTYEETKKSLQHLFRKSSLY
General information:
TITO was launched using:
RESULT:
Template:
1A6F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59345 for 746 contacts (-79.6/contact) +
2D Compatibility (PS) -11033 + (NN) -3166 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 2500
Total energy: -85644.0 ( -114.80 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_1A6F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A6F-query.scw
PDB file :
Tito_Scwrl_1A6F.pdb
: