Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
| 3POR Chain:A ((29-86)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------FTMSGTTDSGL----EFGASFKAHESVGAETGEDGTVFLSGAFGKIEMGDALGASEALFGDLYEVGYTDLDDRGGNDIPYLTGDERLTAEDN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3POR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 898 for 309 contacts (2.9/contact) +
2D Compatibility (PS) -6056 + (NN) -397 + (LL) 7824
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -1081.0 ( -3.50 by residue)
QMean score : 0.266
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