Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKAILLIILIAFVIIAIIKIALLKLYMNTIKPKVDNEGNIITKPVKDDLTPEEREEREFDKDW
2IMJ Chain:A ((114-140))
----------------------------------EFDEQGLMARRFACINDMPIKAQERKFHWPL
General information:
TITO was launched using:
RESULT:
Template:
2IMJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1752 for 78 contacts (22.5/contact) +
2D Compatibility (PS) -2607 + (NN) 979 + (LL) 4668
1D Compatibility (HY) 0 + (ID) 300
Total energy: 4492.0 ( 57.59 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_2IMJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IMJ-query.scw
PDB file :
Tito_Scwrl_2IMJ.pdb
: