Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFYLVRHGKTQWNLEGRFQGANGDSPLLEEAIEELEELGQYLSSIHFDAVYSSDLGRARDTVNILNDANSCPKEIHYTPQLREWALGTLEGCKIATMQAIYPRQMTAFYQNPLQFKHDMFGAESLYQTTHRVESFLRSLASKNY-DKVLIVGHGANLTASIRSLLGYQYGSLHYKDKLDNASLTIIETHDFKDFNCLTWNDKSYLRQEVKMTH
1H2F Chain:A ((4-205))
--LYLTRHGETKWNVERRMQGWQ-DSPLTEKGRQDAMRLGKRLEAVELAAIYTSTSGRALETAEIVRGGRLIP--IYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQR--GERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAFKDTPLDHLWSPPYMYGTSVTIIEV-DGGTFHVAVEGDVSHI-EEVKEV-
General information:
TITO was launched using:
RESULT:
Template:
1H2F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69564 for 1645 contacts (-42.3/contact) +
2D Compatibility (PS) -21264 + (NN) -3692 + (LL) 580
1D Compatibility (HY) -10000 + (ID) 3200
Total energy: -107140.0 ( -65.13 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1H2F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H2F-query.scw
PDB file :
Tito_Scwrl_1H2F.pdb
: