Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRRRIKPIVVAVFFSLFGLLLIIGHLHSTNTLKKELVEAKKTIPSVKASKVPQKSTSSKDKEFVLKPIIDVSGWQLPKEIDYDTLSKNISCVVIRVFGGSKISKTNNAAYTTGIDKSFKTHIKEFQKRNIPVAVYSYALGSSVKEMKEEAQIFYKNAAPYKPTFYWI-DVEEETMSNMNKGVQAFRKELKRLGAKNVGIYIGTYFMTEQGISVKGFDAVWIPTYGSDSGYYEAAPQTELKYDLHQYTSQGYLPGFNQPLDLNQIAVNKDKKKTYEKLFGKVKE |
2NW0 Chain:A ((3-178)) | -------------------------------------------------------------------IVDMSKWN--GSPDWDTAKGQLDLVIARVQDGSNY-----------VDPVYKDYVAAMKARNIPFGSYAFCRFVSVEDAKVEARDFWNRGD--KDSLFWVADVEVTTMSDMRAGTQAFIDELYRLGAKKVGLYVGHHKYEEFGAAQIKCDFTWIPRYGAKPAY---------PCDLWQYDEYGQVPGIGK-CDLNRL--NGDKSLDWFTGKGEE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79358 for 1426 contacts (-55.7/contact) +
2D Compatibility (PS) -19346 + (NN) -11776 + (LL) 6764
1D Compatibility (HY) -14000 + (ID) 3550
Total energy: -121266.0 ( -85.04 by residue)
QMean score : 0.476
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