Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIG-EDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEET-QISQELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQAAKA
2RCV Chain:A ((2-201))
-AYELPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADLDSVPENIRTAVRNNGGGHANHKLFWTLLSPNGGGEPTGALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVN-NGKLEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWNVVNWDEVARLYSER--
General information:
TITO was launched using:
RESULT:
Template:
2RCV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115628 for 1589 contacts (-72.8/contact) +
2D Compatibility (PS) -20966 + (NN) -7491 + (LL) 560
1D Compatibility (HY) -20800 + (ID) 6200
Total energy: -170525.0 ( -107.32 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2RCV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RCV-query.scw
PDB file :
Tito_Scwrl_2RCV.pdb
: