Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKSKKIENYQLLLLQAQALFSDETNALANLSNASAMLNAMLPNSVFTGFYLFDGKELILGPFQGGVSCVHITLGKGVCGESAQTAKTLIVDDVTKHANYISCDSKAMSEIVVPMFKNGKLLGVLDLDSSLVADYDEIDQEYLEKFVGILVEHTIWNLDMFGVEK
3KSF Chain:A ((14-155))
--------NYTLLKKQAASLIEDEHHMIAILSNMSALLNDNLDQINWVGFYLLEQNELILGPFQGHPACVHIPIGKGVCGTAVSERRTQVVADVHQFKGHIACDANSKSEIVVPIFKDDKIIGVLDIDAPITDRFDDNDKEHLEAIVKIIEKQLA----------
General information:
TITO was launched using:
RESULT:
Template:
3KSF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81830 for 1072 contacts (-76.3/contact) +
2D Compatibility (PS) -15676 + (NN) -7421 + (LL) 1580
1D Compatibility (HY) -14400 + (ID) 3450
Total energy: -121197.0 ( -113.06 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_3KSF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KSF-query.scw
PDB file :
Tito_Scwrl_3KSF.pdb
: