Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKDEMIAKGAKYIQSIYQDPFIQGIIKGRLDHDVICHYLQADNIYLGKFADIYALCLAKSDNLRDKQFFLEQIDFTLNRELADGEGPHQALAAYTNRSYQDIIEKGVWYPSADHYIKHMYFH-FYENGIAGALAAMSPCPWIYHQLAKKIIEENQFLNGNPFNNWITFYANDTVEELMENYFRMMDYYAQNLSKEKQADLVDAFVKSCQMRDVFFKWQ
3NO6 Chain:A ((34-231))
-------------IDDIYNDGFIQDLLAGKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFMLEGEVE----AHEVLADFINEPYEEIVKEKVWPPSGDHYIKHMYFNAFARENAAFTIAAMAPCPYVYAVIGKRAMEDPKLNKESVTSKWFQFYSTEM-DELVDVFDQLMDRLTKHCSETEKKEIKENFLQSTIHERHFFNMA
General information:
TITO was launched using:
RESULT:
Template:
3NO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147503 for 1487 contacts (-99.2/contact) +
2D Compatibility (PS) -20682 + (NN) -4552 + (LL) 1100
1D Compatibility (HY) -20000 + (ID) 3500
Total energy: -195137.0 ( -131.23 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_3NO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NO6-query.scw
PDB file :
Tito_Scwrl_3NO6.pdb
: