Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIWTNLGRFAFIETEHVNLRPVAYTDREAFWRIASKRTNLQFIFPVQTSKKESDFLLVHSFMKEPLGVWAIEDKVSHKMFGVIRFENIDLSKKTAEIGYFLKESSWGQGIMTECLKTLSFFAFQEFGMDKLIIVTHKENIASQKVALKAHFKQSRSFKGSDRYTRRIRDYIEFQLTRGDYRYE
1S7F Chain:A ((94-180))
---------------------------------------------------------------------------CQNEMAGVLSFNAIEPINKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGDYHDVNMYARII------
General information:
TITO was launched using:
RESULT:
Template:
1S7F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40720 for 509 contacts (-80.0/contact) +
2D Compatibility (PS) -9523 + (NN) -2735 + (LL) 6916
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -51512.0 ( -101.20 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_1S7F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7F-query.scw
PDB file :
Tito_Scwrl_1S7F.pdb
: