Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKAVHHIAIIVSDYEKSKDFYVNKLGFEIIRENHRPERHDYKLDLRCGDIELEIFGNRLDDPEYETPPQRIGRPNWPREACGLRHLAFYVPDVEAYKIELENLGIFVEPIRYDDYTGKKMTFFFDPDGLPLELHE
2P25 Chain:A ((3-126))
--FKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIF----------ISDQFPARPSYP-EALGLRHLAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE
General information:
TITO was launched using:
RESULT:
Template:
2P25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43238 for 770 contacts (-56.2/contact) +
2D Compatibility (PS) -13519 + (NN) -6838 + (LL) 404
1D Compatibility (HY) -8000 + (ID) 3150
Total energy: -74341.0 ( -96.55 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_2P25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P25-query.scw
PDB file :
Tito_Scwrl_2P25.pdb
: