Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKRITLAVTGSISAYKAADLTSQLTKIGYDVHIIMTQAATEFITPLTLQVLSKNPIHLDVMDEHNPKI---INHIELAKRTDLFIVAPASANTIAHLAYGFADNIVTSVALAMPDETPKLIAPAMNTKMYHNTITQRNIDILKKIGYQEIEPRISLLACGDTGQGALADISTILKCIQEVAN
1E20 Chain:A ((21-194))
---RVLLAASGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWN-KIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYGNGAMAEPSLIYSTVRLFWE
General information:
TITO was launched using:
RESULT:
Template:
1E20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122641 for 1438 contacts (-85.3/contact) +
2D Compatibility (PS) -18233 + (NN) -3450 + (LL) 428
1D Compatibility (HY) -13200 + (ID) 3050
Total energy: -160146.0 ( -111.37 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_1E20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E20-query.scw
PDB file :
Tito_Scwrl_1E20.pdb
: