Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIGIVGTNSNKSTNRQLLQYMQQHFADKAEIE-LIEVKDLPLFNKPA--DKNVPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLS-YGIYPLLNKPVMITGASYGTLGSSRAQLQLRQIL--------NAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
3SVL Chain:A ((5-152))
LQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDPQTGEVIDQGTLDHLTGQLTAFGEFIQ--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SVL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81419 for 999 contacts (-81.5/contact) +
2D Compatibility (PS) -15085 + (NN) -9267 + (LL) 1832
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -117839.0 ( -117.96 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_3SVL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SVL-query.scw
PDB file :
Tito_Scwrl_3SVL.pdb
: