Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGLKSLYTLLGL-------ISLTLLGFVAVISKQHIY-LPSFNWLDWDFNLPSPIDVGMYHYFFWGALVLFVIVLLAILVVLFYPRRYTEYKLADKTGKLMLKKSAIEGFVKTEVLKTGLMKSLSVTAHLYKKKVKVDVKGLLTSRTNVPEQLEHIQSDVELGLKEFFGLEKKMNTRVFVKQVEEENVGNAKTNKSRVE
3LW5 Chain:A ((321-402))
--QGHKGLYEILTTSWHAQLSINLAMLGSLTIVVAQHMYSMPPYPYLATDY--ATQLSLFTHHMWIGG----FLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGTTAPGATASTSLTWGGGDLVAVGNKVALLPIP
General information:
TITO was launched using:
RESULT:
Template:
3LW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45110 for 401 contacts (-112.5/contact) +
2D Compatibility (PS) -7649 + (NN) -6706 + (LL) 964
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: -66901.0 ( -166.84 by residue)
QMean score : 0.039
(partial model without unconserved sides chains):
PDB file :
Tito_3LW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LW5-query.scw
PDB file :
Tito_Scwrl_3LW5.pdb
: