Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRLEIVDSKLRQAKKTEEYFNAIRTNIQFSGKENKI--LAITSVREGEGKSTTSTSLALSLAQAGFKTLLIDADTRNSVMSGTFKATGTIKGLTNYLSGNADLGDIICETNVPRLMVVPSGKVPPNPTALLQNAYFNKMIEAIKNIFDYIIIDTPPIGLVVDAAIIANACDGFILVTQAGRIKRNYVEKAKEQMEQSGSKFLGIILNKV--NESVATYGDYGDYGNYGKRDRKRK
3BFV Chain:A ((64-256))
------------------EKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNN-EGLSSLLLNWSTYQDSIISTEIEDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPK------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BFV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128577 for 1573 contacts (-81.7/contact) +
2D Compatibility (PS) -20583 + (NN) -8641 + (LL) 2108
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -174943.0 ( -111.22 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3BFV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BFV-query.scw
PDB file :
Tito_Scwrl_3BFV.pdb
: