Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITF-----PEFTPGHDWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK
1IRY Chain:A ((4-133))
-SRLYTLVLVLQPQRVLL---GMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVH-----VFCTDSIQGTPVESDEMRPC---WFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
General information:
TITO was launched using:
RESULT:
Template:
1IRY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19391 for 958 contacts (-20.2/contact) +
2D Compatibility (PS) -13517 + (NN) -2591 + (LL) 1176
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -46023.0 ( -48.04 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_1IRY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IRY-query.scw
PDB file :
Tito_Scwrl_1IRY.pdb
: