Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEEKIAFIEENRKKAARKRVSH
4KP1 Chain:A ((244-269))
-----------------------------KTGIIEPDEKTIQYVKEAMKKHGTERPFE
General information:
TITO was launched using:
RESULT:
Template:
4KP1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7124 for 92 contacts (77.4/contact) +
2D Compatibility (PS) -2845 + (NN) -234 + (LL) 3036
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 4531.0 ( 49.25 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_4KP1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KP1-query.scw
PDB file :
Tito_Scwrl_4KP1.pdb
: