Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERDGYETKNVDNYAGHFTFGQGEEELGIFGHLDVVPAGSGWDTDPYEPVIKDNRLYARGSSDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSG----ENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVYGKSAHGSTPQEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDETNDDNTIALNFRYPQGTDAKTIQTKLEKLNGVEK----VTLSDHEHTPHYVPMDDELVSTLLAVYEKQTGLKGHEQVIGGGTFGRLLERGVAYGAMFPGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK |
3KHX Chain:A ((2-466)) | ----WKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVDHIAGRIEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPT--LGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVH------GVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMK-------DVTTNIGVITYDNEN-AGLFGINLRYPEGFEFEKAMDRFA--NEIQQYGFEVKLGKVQ-PPHYVDKNDPFVQKLVTAYRNQTN-----------------------------------QKNEYITKKQLFNATSIYLEAIYSLCV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KHX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173546 for 3391 contacts (-51.2/contact) +
2D Compatibility (PS) -43208 + (NN) -16710 + (LL) 1844
1D Compatibility (HY) -34800 + (ID) 7900
Total energy: -274320.0 ( -80.90 by residue)
QMean score : 0.586
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