Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIIIGADTAGSKLKDVVKDFLVGENFEVVDVT-QDGQDFVDVTLAVAAEVNKQEENLGIVIDAYGAGPFMVATKIKGMVAAEVSDERSAYMTRGHNNSRMITMGSEIVGEGLAKNIAKGFVNGKYDGGRHQIRVDMLNKMC
4LFL Chain:A ((21-162))
MDVIIGADKDGFAMKEQVKKYLEEHQYRVADVTPEPAEDFVESSLAVTKKLLNSDAHKAIMFDRYGVGSAMASNKVKGMVTAVVEEENTAHMTAEHNGAKAIAIGTGITGYDRALVIIQRYLDTEYAGGRHQIRLDMLEKMI
General information:
TITO was launched using:
RESULT:
Template:
4LFL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68060 for 1203 contacts (-56.6/contact) +
2D Compatibility (PS) -14950 + (NN) -7186 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 2950
Total energy: -104346.0 ( -86.74 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_4LFL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LFL-query.scw
PDB file :
Tito_Scwrl_4LFL.pdb
: