Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYSGKKAIVFSLFGIAFGYFCHRMILLYDSLPNQPPIEKIAYLFSDGQKVLMQQPWEFGFTKRSLLAFVSGFLSMCLVYLYVSTGQKIYREGAEYGSARFGTRKEKRFFYSKNPFNDTILAQDVRLTLLEKKSPKFDRNKNLIVIGGSGAGKTFRFVKANLIQLNCSN-----IVVDPKDHLAEKTGKLFLENGYQVKVLDLVNMTNSDGFNPFRYVETENDLNRTLTVYFNNTKGTGSRSDPFWDEASMTLVRAIASYLVDFYNPPGSAKEEAEQRRKRGCYPAFSEIGKLIKLLSKGDNQDKSVLEVMFEEYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVIDVTKRDTLDLKTWGTQKTMVYLVIPDNDTTFRFLSALFFSTVFSTLTRQADVDFKGKLPIHVRSYLDEFPNIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLLYLGGNDEETFKFMSALLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGRMRRDECLVRIAGVPVFRSKKYLPTRHKNWKLLAEKETDDRWCHYHINPLSHDEPLDLFDHKMRDLTAETTLH |
3FMO Chain:B ((112-186)) | ------------------------------------------------------------------------------------------------------------------FNRPSKIQENALPLMLAEPPQ-----NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKRE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 925 for 387 contacts (2.4/contact) +
2D Compatibility (PS) -7754 + (NN) -6343 + (LL) 27668
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: 10346.0 ( 26.73 by residue)
QMean score : 0.270
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