Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKVQTGGKLYIAGEYAILYPGQVAILKNIPIYMTALATFADNYSLYSDMFNYTAS------LQPD-KQYSLIQETILLMEEWLINFGKNIKPIHLEITGKL-ERYGLKFGIGSSGSVVVLTIKAMAALYEIEMPSDLLFKLSAYVLLKRGDNGSMGDIACIAYEHLISYSAFDRRAVSKMIETKPLEQVLEAEWGYRITKIQASLEMDFLVGWTMQPSISKEMINIVK------STITQRFLDDTNYQVVQLLSAFKEGDKEAIKRCLEEISLLLFNLHP----SIYTDKLQKLKEASKGLDIVTKSSGSGGGDCGIAISFNKNDNQTLIKRWESAGIELLSKETLS |
| 3K17 Chain:A ((7-351)) | -LQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNELWIPHYENPVSWPIGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMVIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSSIKENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAEKLVNEWEKLGIKHLPFHTGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215756 for 2884 contacts (-74.8/contact) +
2D Compatibility (PS) -34939 + (NN) -10055 + (LL) 208
1D Compatibility (HY) -14800 + (ID) 5250
Total energy: -280592.0 ( -97.29 by residue)
QMean score : 0.517
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