Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQLIALDMTDPLST------------------------AIFAALDYLG---KTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIGFSTVPMHLN------AYLVIADTGIHGHTKEAVDKVKSSGEAVLPFLKELGYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV |
| 1VIS Chain:A ((9-288)) | -----------SKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKI--NISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITDTSTITYKGILE-IKNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKTAELVNEV-AKIENKDEIFKEID---KVIDEALKIKNKEDFGKLMTKNHELLKKLNISTPKLDRIVDIGNRFG-FGAKLTGAGGGGCVIILVNEEKEKELLKELNKEDVRIFNCRMMN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120290 for 2018 contacts (-59.6/contact) +
2D Compatibility (PS) -27081 + (NN) -11505 + (LL) 1672
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -178154.0 ( -88.28 by residue)
QMean score : 0.433
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