Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNIYGDYGRYLPLILEDFSQRIQLENDKAKVETGYKLYEHIIGRIKTSDSMIEKCRRKQLPVTVDSALKAIRDSIGVRIICGFVNDIYQIVERIKSFDDCRIVVEKDYIQHVKPNGYRSYHVILE--IDTPYPDCLGNSEGKYYIEIQLRTIAQDSWASLEHQMKYKHDIENPERIVRELKRCADEMASVDLTMQTIRQLIESGTKKE
2BE3 Chain:A ((43-200))
----------------------------------------EFVTGRVKPIESIKEKMARR--GITYATLEHDLQDIAGLRVMVQFVDDVKEVVDILHKRQDMRIIQERDYITHRKASGYRSYHVVVEYTVDTI------NGAKTILAEIQIRTLAMNFWATIEHSLNYKYQGDFPDEIKKRLEITARIAHQLDEEMGEIRDDIQEAQALF
General information:
TITO was launched using:
RESULT:
Template:
2BE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53367 for 993 contacts (-53.7/contact) +
2D Compatibility (PS) -16996 + (NN) -7286 + (LL) 2940
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -88759.0 ( -89.38 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2BE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BE3-query.scw
PDB file :
Tito_Scwrl_2BE3.pdb
: