Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKGQVNDTKQSYSLRKYKFGLASVILGPFIMVTSPVFADQTTSVQVNNQTGTSVDANNSSNETSASSVITSNNDSVQASDKVVNSQNTATKDITTPLVETKPMVEKTLPEQGNYVYSKETEVKNTPSKSAPVAFYAKKGDKVFYDQVFNKDNVKWISYKSFCGVRRYAAIESLDPSGGSETKAPTPVTNSGSNNQEKIATQGNYTFSHKVEVKNEAKVASPTQFTLDKGDRIFYDQILTIEGNQWLSYKSFNGVRRFVLLGKASSVEKTEDKEKVSPQPQARITKTGRLTISNETTTGFDILITNIKDDNGIAAVKVPVWTEQGGQDDIKWYTAVTTGDGNYKVAVSFADHKNEKGLYNIHLYYQEASGTLVGVTGTKVTVAGTNSSQEPIENGLAKTGVYNIIGSTEVKNEAKISSQTQFTLEKGDKINYDQVLTADGYQWISYKSYSGVRRYIPVKKLTTSSEKAKDEATKPTSYPNLPKTGTYTFTKTVDVKSQ---PKVSSPVEFNFQKGEKIHYDQVLVVDGHQWISYKSYSGIRRYIEI
1R77 Chain:A ((276-344))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGTLYKSESASFTANTDIITRLTGPFRSMPQSGVLRKGLTIKYDEVMKQDGHVWVGYNTNSGKRVYLPV


General information:
TITO was launched using:
RESULT:

Template: 1R77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6040 for 411 contacts (-14.7/contact) +
2D Compatibility (PS) -7487 + (NN) -4345 + (LL) 25100
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 3628.0 ( 8.83 by residue)
QMean score : 0.424

(partial model without unconserved sides chains):
PDB file : Tito_1R77.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R77-query.scw
PDB file : Tito_Scwrl_1R77.pdb: