Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPTDSKASYKAIVKKFEKE-NKGVTVKMIESNDSKAQENVKKDPSKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSY---ETITSKGKF---GQQLKAA-------NSYVTGPLFLSVGDTLFGKSGEDAKGTNWGNEAGVSVL--------KWIADQKKNDGFVNLTAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNAESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGKIKSSDYLKRLKQFDKDIAKTK |
| 2XD3 Chain:A ((37-392)) | ---------------------------------------LTVYVDEGYKSYIEEVAKAYEKEAGVKVTLKTGDALGGLDKLSLDNQNGNVPDVMMAPYDRVGSLGSDGQLSEV--KLSDGAKTDDTTKSLVTAA-NGKVYGAPAVIESLVMYYNK-DLVKDAPKTFADLENLAKDSKYAFAGEDGKTTAFLADWTNFYYTYGLLAGNGAYVFGQNGKDAKDIGLANDGSIVGINYAKSWYEKWPKGMQDTEGAGNLI----QTQFQEGKTAAIIDGPWKAQAFKDA--KVNYGVATIPTLPNGK---EYAAFGGGKAWVIPQA-----VKNLEASQKFVDFLVATEQQKVLYDKTNEIPANTEARSYAEGKNDELTTAVIKQF---KNTQPLPNISQMSAVWDPAKNMLFDAVSGQKDAKTAANDAVTLIKETL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26857 for 2825 contacts (-9.5/contact) +
2D Compatibility (PS) -35428 + (NN) -10784 + (LL) 3500
1D Compatibility (HY) -14000 + (ID) 5550
Total energy: -89119.0 ( -31.55 by residue)
QMean score : 0.361
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