Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSQKVILTNMCLIEDNKGRIVMQIRDPKRYSW-SGAALPGGHIEEGESLYDALVREVHEETGLTISNPKLVGMKHWYTDE-GIRYLVFLYKTYDFSGELQSSDEGDVVWIERSQLDKIELAYDMLNLLRVFDEDDISEMFYSKRLEDGFIRKFY
3EXQ Chain:A ((3-134))
LTRTQPVELVTMVMVTDPETQRVL-VEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDDRQHRKLGLLYRASNFTGTLKASAEGQLSWLPITALTRENSAASLPEFLQVFTGTASTLVSDSWNGNLRIDEGHH
General information:
TITO was launched using:
RESULT:
Template:
3EXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76212 for 874 contacts (-87.2/contact) +
2D Compatibility (PS) -13988 + (NN) -5935 + (LL) 120
1D Compatibility (HY) -9600 + (ID) 2300
Total energy: -107915.0 ( -123.47 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3EXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXQ-query.scw
PDB file :
Tito_Scwrl_3EXQ.pdb
: