Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVLISAYK-----GQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLR-LFTIGKYSSGVSQKVQQFRQ------NVVMLVIAIIQGLAIAISFQYHNG--FSLTKL-------LLATMILVTGAYIISWIGNLNAEYGFG-GMTILVVVGMLVGQFNNIPLIFELFQDGYQ--LAIILFLLWTLVAMYLMITFERSEYRIPVM--RTSIHNRLV--DDAYMPIKVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFLGGVPLLFALGNDDLRTVSSMTGIFMMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 2ZQP Chain:Y ((16-382)) | -------------QRVLFTLLVLAAYRLGAFIPTPGVDLDKIQEFLRTAQGGVFGII-NLFSGGNFERFSIFALGIMPYITAAIIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLATAFLGAEGGRFLLPGWSPGPFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAGIVVEWLPQILRTIGLIRTGEVNLVAFLFFLAFIVLAFAGMAAVQQAERRIPVQYAR-------YGGQATYIPIKLNAAGVIPIIFAAAILQIP----IFLAAPFQDNPVLQGIANFFNPTRPSGLFIEVLLVILFTYVYTAVQFDPKRIAESLREYGGFIPGIRPGEPTVKFLEHIVSRLTLWGALFLGLVTLLPQIIQNLTGIHSIAFSGIGLLIVVGVALDTLRQVESQLMLR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260973 for 2339 contacts (-111.6/contact) +
2D Compatibility (PS) -34929 + (NN) -7679 + (LL) 3632
1D Compatibility (HY) -35200 + (ID) 4650
Total energy: -339799.0 ( -145.28 by residue)
QMean score : 0.233
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