Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLDKFLVECGLGSRTQVKLILKKKQISVNGNSETSPKVQVDEYRDEIKYNGT-LVSYEKFVYYMLHKPKGVISATDDPSHKTVLDLLDKTARDKAVFPVGRLDIDTTGLLLITNNGELAHKMLSPKKHVDKCYEAKISGIMTEDDILAFDKGIIL---KDFTCLPALLEIVEVNQVKKQSLVKITIKEGKFHQVKRMVAACGKEVLELKRLRMGNLQLDKQLESGQWRRLTIKEIEKLEKYMQ
1KSK Chain:A ((5-233))-RLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHD-VAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWK-LHAAGRLDIDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTK-PAVLEVITPTQVR------LTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV----


General information:
TITO was launched using:
RESULT:

Template: 1KSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86134 for 1581 contacts (-54.5/contact) +
2D Compatibility (PS) -23646 + (NN) -3546 + (LL) 1688
1D Compatibility (HY) -15200 + (ID) 4550
Total energy: -131388.0 ( -83.10 by residue)
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_1KSK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KSK-query.scw
PDB file : Tito_Scwrl_1KSK.pdb: