Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLNDNNQKKWKNRTLTSSMEFAVTGIFTAFKEERNMRKHLVSAILVILAGLTFQVSMVEWLFLLLSIFLVITFEIINSAIENVVD-LASNYHFSMLAKNAKDMAAGAVLVVSLFAVLVGLIIFIPKILALLL
3ZE4 Chain:A ((25-125))
---------------------YSWKGLRAAWINEAAFRQEGVAVLLAVVIACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYH--ELSGRAKDMGSAAVLIAIIVAVITWCILLWSHF-----
General information:
TITO was launched using:
RESULT:
Template:
3ZE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71502 for 609 contacts (-117.4/contact) +
2D Compatibility (PS) -10358 + (NN) -5670 + (LL) 1628
1D Compatibility (HY) -14000 + (ID) 1750
Total energy: -101652.0 ( -166.92 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_3ZE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZE4-query.scw
PDB file :
Tito_Scwrl_3ZE4.pdb
: