Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYKIIASLFLVLIPIFSQVLVKIFKLKKFNIMFPDVAFPIFVFLIPLISSSLLKQNLLPYYLILISLLAIGITIKLLRTKTLFSYKRFLKLFWRSGFILTFLFYLGLLVIIFIKVQ
3WU2 Chain:M ((9-28))
---GLIATALFVLVPSVFLIILYVQTESQQ---------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6047 for 74 contacts (-81.7/contact) +
2D Compatibility (PS) -2002 + (NN) 41 + (LL) 9284
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -924.0 ( -12.49 by residue)
QMean score : 0.057
(partial model without unconserved sides chains):
PDB file :
Tito_3WU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WU2-query.scw
PDB file :
Tito_Scwrl_3WU2.pdb
: