Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFD-TTPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQ----GIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK
2YLN Chain:A ((51-281))-------------------------------ERINNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWS--GAVLVAHNDSNI--KSIADIKGVKTAQSLTSNYGEKAKAAGAQLVPVDGLAQSLTL--IEQKRADATLNDE----LAVLDYLKKNPNAGVKI--VWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFF-GKDISVQ-------------


General information:
TITO was launched using:
RESULT:

Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63217 for 1868 contacts (-33.8/contact) +
2D Compatibility (PS) -24522 + (NN) -10294 + (LL) 3408
1D Compatibility (HY) -12000 + (ID) 3800
Total energy: -110425.0 ( -59.11 by residue)
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_2YLN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YLN-query.scw
PDB file : Tito_Scwrl_2YLN.pdb: