Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAK--IKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNV---SGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPS-DAIFVEKSDKNSKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW |
| 4QHQ Chain:A ((1-230)) | ---------------------------------VIKVGTVAGPDSE--VWQVVQKVAKEKEGLNVKVIEFNDYVQPNAALDSGDLDANSFQHQPYLDSQVKQRGYKIVSAGLTYISPIGVYSKKFKSLKDLPQGAKLAVPNDPSNENRALLLLQTQGVIKLKAGAGTGGNNATVLDIAENPKKLKISELDAAQLPRVLSDVDAAVINTNYALAANLQPTKDAIALESL---TSPYANLIAVR---AKDKDQPWVKKLVKAYQSPEVKEFIKKQFKGSMVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60014 for 1874 contacts (-32.0/contact) +
2D Compatibility (PS) -23826 + (NN) -7074 + (LL) 2796
1D Compatibility (HY) -18000 + (ID) 4950
Total energy: -111068.0 ( -59.27 by residue)
QMean score : 0.447
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