Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIKKVLSVTGIILVTVASLAACSSKSHTTKTGKKEVNFATVGTTAPFSYV-KDGKLTGFDIEVAKAVFKGSDNYKVTFKKTEWSSVFTGIDSGKFQMGGNNISYSS-ERSQKYLFSYPIGSTPSVLAVPKNSNIKAYNDITGHKTQVVQGTTTAKQLENFNKKHQKNPVTLKYTNENITQILTNLSDGKADFKLFDGLTVNAIIK---NQGLTNLKTIPLTMRDQPYIYFIFGQDQKDLQKYVNNCLKQLRKDGTLSKIAKEYLGGDYVPNEKDLVTPKEK |
| 2YLN Chain:A ((56-279)) | ---------------------------------KGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKL-GVKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKT--AQSLTS-----NYGEKAKAAGAQL-VPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKGNDEA-VAKF-STAINELKADGTLKKLGEQFFGKDISVQ---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59443 for 1825 contacts (-32.6/contact) +
2D Compatibility (PS) -23508 + (NN) -7907 + (LL) 4332
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -103176.0 ( -56.53 by residue)
QMean score : 0.410
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