Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGHGIDLQEIEAITKAYERNQRFAERVLTEQELLLFKGISNPKRQMSFLTGRWAAKEAYSKALGTGIGKVNFHDIEILSDDKGAPLITKEPFNGKSFVSISHSGNYAQASVILEEEK
1FTF Chain:A ((1003-1118))
MIVGHGIDIEELASIESAVTRHEGFAKRVLTALEMERFTSLKG-RRQIEYLAGRWSAKEAFSKAMGTGISKLGFQDLEVLNNERGAPYFSQAPFSGKIWLSISHTDQFVTASVILEE--
General information:
TITO was launched using:
RESULT:
Template:
1FTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40826 for 867 contacts (-47.1/contact) +
2D Compatibility (PS) -12737 + (NN) -8560 + (LL) 28
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -78695.0 ( -90.77 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1FTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FTF-query.scw
PDB file :
Tito_Scwrl_1FTF.pdb
: