Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPY-VVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQD-------------IPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYN--QVVG-PNNKHNAVSVKVALHNQAIFLLLQDGF---EPEKIVIDAFTSSKNYQNYLKNEKNQFKQTITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGISSLEHCAKLHFANTKKAQALLK |
| 2D0B Chain:A ((2-307)) | -SNYVIQADQQLLDALRAHY-EGALSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKW---ISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETVPHAVTVLDNPQYNRWQRSGMPQTKMKAL-----LHNRTLVKLV-DAIAPAEPEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARIIRARGEEMLETCAKLHFANTKKALAIAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125917 for 2311 contacts (-54.5/contact) +
2D Compatibility (PS) -30972 + (NN) -13291 + (LL) 1160
1D Compatibility (HY) -20000 + (ID) 6000
Total energy: -195020.0 ( -84.39 by residue)
QMean score : 0.593
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