Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHQILQNYINSHNLPIIEKDYHKY-LTFESLE-EDYTYILKDGIVKQSVLSKYGTEFNLRYVTGLEITSILNTDYSQHMGEPYNVRIESETAHFYKVRRSTFLKDINNDIELQGYVKDFYHNRLEKSMKKMQCMLTNGRIGAISTQLYDLSKMFGEERDNGDIYINFVITNEELGKFCGISTGSSVSRILKQLKDDHIIRIEKQHIIITNVEKLKDHIVF |
2BEO Chain:B ((16-216)) | ----------------IKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGY-YNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSS-----SAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -49489 for 1336 contacts (-37.0/contact) +
2D Compatibility (PS) -20310 + (NN) 149 + (LL) 644
1D Compatibility (HY) -13200 + (ID) 2800
Total energy: -85006.0 ( -63.63 by residue)
QMean score : 0.424
|
|
|