Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKIALFAGGDLTYFE----YDFDYFVGIDRGSLFLLKNGLSLDMAVGDFDSITEDELLYIKHYCSNIVSASAEKNDTDTELALKTIFKEFPEAQVTVFGAFGGRIDHMMSNIFLPSDTDLEPFMSQIRLKDEQNIVTYLPSGKNQVSR---IEGMSYVSFMPESESTLQISGAKYELNKSNYFKKKMYSSNEFMTSPIEVELKDGYLIIIYSKDRG
3MEL Chain:A ((2-214))
-SRVLLVAGGNPSDWPTIEPATYDYFVGIDRGCLHLLEADLPLQLAVGDFDSLSREEYHFVQETTETLIQAPAEKDDTDTQLALQEALQRFPQAEMTIIGATGGRIDHLLANLWLPFEPRFQGVLRQIRLCDRQNSIQYYAPGSYIVPKEPDKEYLAYCCLTPVENLTLRRS--KYLLTNQDVPYPTSYASNEFIEEAAAFSFDAGMIAVIQSKDK-
General information:
TITO was launched using:
RESULT:
Template:
3MEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126743 for 1633 contacts (-77.6/contact) +
2D Compatibility (PS) -22174 + (NN) -11565 + (LL) 8
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -182124.0 ( -111.53 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3MEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MEL-query.scw
PDB file :
Tito_Scwrl_3MEL.pdb
: