Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIFILEDDFVQQAHFEKIIKEIRVQYNLHFKTVETFAKPVQLLESIYEIGLHNLFFLDIEIKNDEQMGLEVAKQIRQVDPYAQIVFVTTHSELMPLTFRYQVSALDYIDKGLSQEEFSQRIEEVLLYVDGICNKPLVENSFYFKSRYSQVQLPFNDLLYIETSSRSHRVVLYTEKDRMEFTATLGDILKQEPRLFQCHRSFLVNPLNIFKVDRIDRLVYFQNGTTCLVSRNKVRDIVSIVDKYQKDRKR
4MLD Chain:A ((1-133))
MKVLILEDVIEHQVRLERILDEISKESNIPI-SYKTTGKVREFEEYIENDEVNQLYFLEIDIHGIEKKGFEVAQLIRHYNPYAIIVFITSRSEFATLTYKYQVSALDFVDKDINDEMFKKRIEQNIFYTKSM----LL----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MLD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112548 for 1030 contacts (-109.3/contact) +
2D Compatibility (PS) -14253 + (NN) -6006 + (LL) 8364
1D Compatibility (HY) -14400 + (ID) 2700
Total energy: -141543.0 ( -137.42 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_4MLD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MLD-query.scw
PDB file :
Tito_Scwrl_4MLD.pdb
: