Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAFADVAKMKKIKEDIKSHEGQMVELTLENGRKREKNKIGRLIEVYPSLFIVEYKDTAAVPGAIDNTYVESYTYSDILTEKTLIRYFDDESAE
3F41 Chain:A ((179-229))
LSPVYVNYNKVRTEEEMVKQHGANYFRLTLQDHFRPDDPDVDKFLEFYKSLPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDDIIQRQKL
General information:
TITO was launched using:
RESULT:
Template:
3F41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3363 for 202 contacts (16.6/contact) +
2D Compatibility (PS) -5113 + (NN) 1744 + (LL) 0
1D Compatibility (HY) -5600 + (ID) 600
Total energy: -6206.0 ( -30.72 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_3F41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F41-query.scw
PDB file :
Tito_Scwrl_3F41.pdb
: