Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIVEGVSLHLIKNQQFKTNHLTFRFSGDFNNKTVARRSLVAQMLVTANAKYPKVQEFREKLASLYGASLSTKISTKGLVHIVDIDIVFVKNTFTLEQENIVEQIITFLEDMLFSPLISLEQYQTSIFDTEKKNLIQYLEA--DIEDNFYSSDLALKSLFYNNKTLRLPKYGTASLVESENSFTAYQEFQKMLKEDQLDIFVVGDFDDY---RMIQAFNRMAFEPRHKVLAFDYTQTYENITRSQ-VEDKDVNQSIMQLAY-HLPITYKDEDYFALIVFNGLFGAFAHSLLFTEIREKQGLAYTIGSQFDSF--TGLFTIYAGIDKENRERFLKLINKQFNNIKMGRFSSTLLKQTKDILKMNYVLA--SDNPKVIVDHIYHEHYLDQFHTSALFIDKVDDVTKSDIVSVATKLKLQAFYFLEGN |
| 3HDI Chain:A ((97-388)) | -------------------------------------------------------------------------------------------------------QAIDTLSDMFFH-----STFQKEELEKERKVVFEEIKMVDDTPDDIVH-DL-LSSATYGKHSLGYPILGTVETLNSFNEGMLRHYMDRFYTGDYVVISVAGNVHDELIDKIKETFSQV------KPTTYNYQGEKPMFLPNRIVRKKETEQAHLCLGYPGLPI--GDKDVYALVLLNNVLGGSMSSRLFQDIREKRGLCYSVFSYHSSFRDSGMLTIYAGTGHDQLDDLVYSIQETTSALAEKGLTEKELENGKEQLKGSLMLSLESTNSRMSRNG-KNELLLKKHRSLDEMIEQINAVQKQDVSRLAKILLSASPSISLIN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114066 for 1867 contacts (-61.1/contact) +
2D Compatibility (PS) -29610 + (NN) -7225 + (LL) 9924
1D Compatibility (HY) -16400 + (ID) 3900
Total energy: -161277.0 ( -86.38 by residue)
QMean score : 0.425
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