Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFIKRLEDAYETLLGNYPAGVSSTSTSKYNEIRKIVSEAFLIGE--NEVYVTGTS--RRISNLDTRFAQGNQRNKHTRMAVAFISIPSVDDSELDELIIRTRNSAITTSSKFCNGEERGTIFDGILLFLVFEGETKVYPLAFLVFENDFELKEKAEELIPGIELKEYPRANQSPAQENNKSAKNEDEESAKSYVVFLDIEEDGSIVEFVEDKDKTYRIGDMIWTASHTNGSSAITRRLEVIEVVENLVVCKIKHKYNEPVDKNSLLKFVNIEQDLISFLDLHPNVQNGSEGFVSGDIVDENATTSSDDLPEDFENN
4NEW Chain:A ((316-385))---------------------------------RTNVSNIYAIGDVTNRVMLTPVAINEAAALVDTVFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 120 -1035 -8.63 -15.68
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -8.63
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.59
QMean score : -0.016

(partial model without unconserved sides chains):
PDB file : Tito_4NEW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NEW-query.scw
PDB file : Tito_Scwrl_4NEW.pdb: