Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIVNLILVAVLIALTAFFVASEFAIIRIRGSRIDQLIAEGNKAAIAVKKVTTHLDEYLSACQLGITLTSIGLGVLGESTIERLLHPLFVQMNVPGSLSHVISFIFAYAIITFLHVVVGELAPKTVAIQKAEAVSMLFAKPLIWFYRIAFPFIWLLNNSARLLTKAFGLETVSENELAHSEEELRIILSESYKSGEINQSEFKYVNKIFEFDDRLAKEIMIPRTEIVSLPHDIKISEMMDIIQIEKYTRYPVEEGDKDNIIGVINIKEVLTACISGE--VSVDSTISQFVNPIIHVIESAPIQDLLVKMQKERVHMAILSDEYGGTAGLVTVEDIIEEIVGEIRDEFDIDEISEIRKIGEGHYILDGKVLIDQVNDLLGIHLENEEVDTIGGWFLTQKYD--VEKDDSIIEEGCEFIINEIDGHHVAYIEVKKLQEEELLETANQQEA
4HG0 Chain:A ((51-280))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVV----VPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDEEVDTIGG-LVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQVHVK----------------


General information:
TITO was launched using:
RESULT:

Template: 4HG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 994 -130293 -131.08 -576.52
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -131.08
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_4HG0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HG0-query.scw
PDB file : Tito_Scwrl_4HG0.pdb: