Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSEQLIQAVNKQVANWTVMYVKLHNYHWYVKGKDFFTLHEKFEELYNETATYIDDLAERLLALNGKPIATMKESLETASVKEAAGNETAEQMVQSVYDDFTVIAEELKNGMDLADEVGDETTGDMLLAIHQNIEKHNWMLKAYLG
1JI5 Chain:A ((1-141))---QVIEVLNKQVADWSVLFTKLHNFHWYVKGPQFFTLHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQNSDDEMTSDLLLGIYTELEKHAWMLRAFL-


General information:
TITO was launched using:
RESULT:

Template: 1JI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 572 -59929 -104.77 -425.02
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -104.77
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.625

(partial model without unconserved sides chains):
PDB file : Tito_1JI5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JI5-query.scw
PDB file : Tito_Scwrl_1JI5.pdb: