Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNILLVGMLVLLLMFVSACSGTASKGSSSDSASEKTEMRTYKSPKGNVNIPAHPKRIV--TDFYAGELLSVGANVVGSGSWSFDNPFLKSKLKNVKDVGDPISVEKVMELQPDLIVVMNEENVD--KLKKIAPTVVIPYNTAKNVEDTVSMFGDIAGAKDQAKSFMADFNKKAEAAKKKIAGVIDKDATFGIYENTDKGEFWVFNDNGGRGGQAVYNALGLKAPEKIEQDVIKKGE-MKQLSQEVIPEYAADYMFITDYNPKGESKTLDKLENSSIWKNLDAVKHNRVFINDFDSFYPYDPISVSKQVDIITDMLIKRAEENKK
3G9Q Chain:A ((54-315))---------------------------------------------------IPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKTNGVENIGDGTSVEKVIDLNPDLIIVWTT--ADIKKLEKIAPTVAVKYDKLDNIEQ-LKEFAKMTGTEDKAEKWLAKWDKKVAAAKTKIKKAVG-DKTISIMQTNGK-DIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDFAGDYIFAGPWQSGG----VFE---SSIWKNLNAVKNGHVYKMDPIGFYFTDPISLEGQLEFITESLTK-------


General information:
TITO was launched using:
RESULT:

Template: 3G9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1291 54803 42.45 218.34
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 42.45
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_3G9Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G9Q-query.scw
PDB file : Tito_Scwrl_3G9Q.pdb: