Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
4O9T Chain:A ((9-94))
--------LYIFVLTAFLGYELITRVPVILHTPLMSGSNFIHGVVVVGAMVVLGHAE--TGLEKLIGFLGVILGAANAAGGYAVTVRMLEMFE-RKP-------------
General information:
TITO was launched using:
RESULT:
Template:
4O9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52296 for 469 contacts (-111.5/contact) +
2D Compatibility (PS) -8435 + (NN) -2428 + (LL) 1484
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -75525.0 ( -161.03 by residue)
QMean score : 0.083
(partial model without unconserved sides chains):
PDB file :
Tito_4O9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O9T-query.scw
PDB file :
Tito_Scwrl_4O9T.pdb
: